KEGG   Arabidopsis thaliana (thale cress): AT1G15390
Entry
AT1G15390         CDS       T00041                                 
Symbol
PDF1A
Name
(RefSeq) peptide deformylase 1A
  KO
K01462  peptide deformylase [EC:3.5.1.88]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    AT1G15390 (PDF1A)
Enzymes [BR:ath01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.88  peptide deformylase
     AT1G15390 (PDF1A)
SSDB
Motif
Pfam: Pep_deformylase
Other DBs
NCBI-GeneID: 838109
NCBI-ProteinID: NP_563974
TAIR: AT1G15390
UniProt: Q9FV53 A0A178WDP8
Structure
Position
1:5294629..5295931
AA seq 269 aa
MGLHRDEATAMETLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLLNRKLYNLPTSSSSS
LSTKAGWLLGLGEKKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMR
LAPGVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNK
KALFFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLY
VDKMVPRTFRTVDNLDLPLAEGCPKLGPQ
NT seq 810 nt   +upstreamnt  +downstreamnt
atgggactccaccgagacgaagcgacggccatggaaacccttttcagagtctcacttcgt
ctacttccggtttccgccgccgtgacatgtcgctcgatccgattccccgtttcaagaccc
ggttcctcacacttactgaaccgtaagctgtataatttgcctacttcttcttcctcctct
ttgtcgacaaaagccggttggttattgggtcttggtgagaagaaaaagaaagtggattta
ccggagatagtggcatctggtgacccggttctgcacgagaaggcccgagaagttgacccg
ggagaaatcgggtcggagcgtattcagaagataattgatgatatgattaaagttatgaga
ttggctcctggagttggcctcgctgctcctcaaattggtgttcccttaaggattattgta
ttggaagatacaaaagagtatataagttacgcaccaaaggaagagattcttgctcaagaa
agacgtcattttgatctcatggtgatggtgaatccggttctcaaggagagaagcaacaag
aaagctcttttctttgaaggatgcttgagtgttgatggattcagagctgcggtggagaga
taccttgaggtggtagtgacgggctacgatcgtcaaggaaagaggattgaagtgaatgct
tcaggttggcaagctaggattttgcaacatgagtgtgatcatttggatggtaatctttac
gttgataagatggtaccacgcacttttaggacagtcgacaacttggacttgcctttagct
gagggctgccctaagctcggacctcaatga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (6)   
   PDB (6)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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